README file for Research Data James Cook University repository, created on 29 June 2022 ------------------------------------------------- Citation ------------------------------------------------- Do currents shape global patterns of hybrid richness in coral reef fishes? - Global Ecology and Biogeography Authors: Ng, Isabelle; Bellwood, David R; Siqueira, Alexandre C Corresponding author: Ng, Isabelle (isabelle.ng@my.jcu.edu.au) ------------------------------------------------- Description of files ------------------------------------------------- (1) "Hybrid_data_Ng_etal.csv" This file contains the dataset of coral reef fish hybrids obtained through a literature review, as described in the manuscript. ------------------------------------------------- (2) "Model_data_Ng_etal.csv" This file contains the modelling dataset with all response and explanatory variables. Descriptions of each variable: - Ecoregion: Ecoregion name labels. - Longitude: Longitude of ecoregion centroid. - Latitude: Latitude of ecoregion centroid. - Area_km2: The area of each ecoregion in square kilometre units. - Hybrids_n: The number of unique interpsecific hybrids. - BarrierDist: The distance in kilometres from the ecoregion to the nearest biogeographic barrier. - Barrier: Labels of biogeographic barriers corresponding to those described in Bellwood and Wainwright (2002) and Hodge and Bellwood (2016). - Isolation: Geographic isolation calculated as the distance to the nearest ecoregion divided by the number of ecoregions within the radius (i.e., median distance between all ecoregions in our study). - RichMean: Average species richness calculated from “cellValues_fixed0.5.csv” (Rabosky et al. 2019). Values represent the sum of species richness from all the grid cells within the ecoregion ÷ the number of grid cells within the ecoregion. - EndMean: Average species richness calculated from “cellValues_fixed0.5_Endemics.csv” (Rabosky et al. 2019). Values represent the sum of endemic richness from all the grid cells within the ecoregion ÷ the number of grid cells within the ecoregion. - PropEndMean: Endemism measured by a proportion of endemics (mean) to species richness (mean) (i.e., EndMean ÷ RichMean). - RichTot: Total species richness calculated from "species_by_Ecoregion_fixed0.5.csv" (Rabosky et al. 2019). - EndTot: Total endemic richness calculated from "species_by_Ecoregion_fixed0.5.csv" (Rabosky et al. 2019). Species were flagged as endemic if only found in one ecoregion. Values of 0 were replaced with 0.1 to enable log functioning. - PropEndTot: Endemism measured by the proportion of endemics (total) to species richness (total) (i.e., EndTot ÷ RichTot). - MeanCurrent_ms: The average mean current velocity measured in metres per second. - PhyloDist: Average phylogenetic distance measured by branch lengths between each hybrid. References 1. Bellwood, D. R., & Wainwright, P. C. (2002). The history and biogeography of fishes on coral reefs. Coral reef fishes: dynamics and diversity in a complex ecosystem, 5, 32. 2. Hodge, J. R., & Bellwood, D. R. (2016). The geography of speciation in coral reef fishes: the relative importance of biogeographical barriers in separating sister-species. Journal of Biogeography, 43(7), 1324-1335. https://doi.org/10.1111/jbi.12729 3. Rabosky, D., Chang, J., Title, P. O., Cowman, P. F., Sallan, L., Friedman, M., Kaschner, K., Garilao, C., Near, T. J., Coll, M., & Alfaro, M. E. (2019). Data from: an inverse latitudinal gradient in speciation rate for marine fishes. Dryad10, 5061. https://doi.org/10.5061/dryad.fc71cp4 -------------------------------------------------