Family and population genotypic data from the commercial Infinium ShrimpLD-24 BeadChip

Genotypic data generated by running 1,952 individuals from wild populations and 19 families across the commercial Infinium ShrimpLD-24 BeadChip. Data is associated with the publication: Jones, D.B., Nguyen H.T., Khatkar, M.S., Simma D.B., Jerry, D.R., Raadsma H.W., van der Steen H., Prochaska J., Zenger K.R.. The identification of a major sex QTL in the white-leg shrimp, Litopenaeus vannamei. Aquaculture. (2020). 

The full methodology is available in the Open Access publication from the Related Publications link below.

 

 

    Data Record Details
    Data record related to this publication Family and population genotypic data from the commercial Infinium ShrimpLD-24 BeadChip
    Data Publication title Family and population genotypic data from the commercial Infinium ShrimpLD-24 BeadChip
  • Description

    Genotypic data generated by running 1,952 individuals from wild populations and 19 families across the commercial Infinium ShrimpLD-24 BeadChip. Data is associated with the publication: Jones, D.B., Nguyen H.T., Khatkar, M.S., Simma D.B., Jerry, D.R., Raadsma H.W., van der Steen H., Prochaska J., Zenger K.R.. The identification of a major sex QTL in the white-leg shrimp, Litopenaeus vannamei. Aquaculture. (2020). 

    The full methodology is available in the Open Access publication from the Related Publications link below.

     

     

  • Other Descriptors
    • Descriptor

      This dataset consists of a spreadsheet saved in both MS Excel (.xlsx) and Open Document (.ods) formats.

    • Descriptor type Note
  • Data type dataset
  • Keywords
    • aquaculture
    • Litopenaeus vannamei
    • quantitative trait loci
    • sex-linked markers
    • GWAS
    • monosex culture
  • Funding source
  • Research grant(s)/Scheme name(s)
  • Research themes
    Industries and Economies in the Tropics
    FoR Codes (*)
    • 060408 - Genomics
    • 070201 - Animal Breeding
    SEO Codes
    • 830105 - Aquaculture Prawns
    Specify spatial or temporal setting of the data
    Temporal (time) coverage
  • Start Date 2010/01/04
  • End Date 2013/12/27
  • Time Period
    Spatial (location) coverage
  • Locations
    Data Locations

    Type Location Notes
    The Data Manager is: David Jones
    College or Centre
    Access conditions Conditional
  • Alternative access conditions
  • Data record size 44 MB
  • Related publications
      Name Jones, David B., Jerry, Dean R., Khatkar, Mehar, Raadsma, Herman W., van der Steen, Hein, Prochaska, Jeffrey, Fôret, Sylvain, and Zenger, Kyall R. (2017) A comparative integrated gene-based linkage and locus ordering by linkage disequilibrium map for the Pacific white shrimp, Litopenaeus vannamei. Scientific Reports, 7. 10360.
    • URL https://doi.org/10.1038/s41598-017-10515-7
    • Notes Open Access
  • Related websites
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    • URL
    • Notes
  • Related metadata (including standards, codebooks, vocabularies, thesauri, ontologies)
  • Related data
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    • URL
    • Notes
  • Related services
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    • Notes
    Citation Jones, David; Jerry, Dean (2020): Family and population genotypic data from the commercial Infinium ShrimpLD-24 BeadChip. James Cook University. https://doi.org/10.25903/5ef4068a75bce