Prof Geoff Jones ~ Distinguished Professor
College of Science & Engineering
- About
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- Teaching
- Interests
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- Research
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- Ecology and behaviour of coral reef fishes
- Marine conservation biology
- Ecology and behaviour of kelp forest fishes
- Human impacts on tropical ecosystems
- Management of tropical marine ecosystems
- Experience
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- 2006 to 2013 - Professor, James Cook University (Townsville)
- 1999 to 2005 - Reader, James Cook University (Townsville)
- 1994 to 1998 - Senior Lecturer, James Cook University (Townsville)
- 1992 to 1993 - Lecturer, James Cook University (Townsville)
- 1987 to 1991 - Lecturer, University of Auckland
- 1986 to 1987 - National Research Fellow, University of Sydney
- 1983 to 1986 - Queen's Fellow in Marine Science, University of Sydney
- 1981 to 1983 - Postdoctoral Research Fellow, University of Melbourne
- Research Disciplines
- Socio-Economic Objectives
Prof Geoff Jones is a well-established scientist in the fields of marine ecology and tropical marine conservation, with 30 years of experience in ecological research, undergraduate teaching and graduate supervision. He has published a career total of ~200 refereed papers since 1980, mostly on the ecology, behaviour and conservation of marine fishes on tropical coral reefs and in temperate kelp forests. He supervised a career total of 113 research students to completion (including 50 BSc honours, 31 MSc and 32 PhD students) and hosted 13 post-doctoral research fellows. His undergraduate teaching record includes over 1,000 students that have completed his 3rd year BSc “Marine Conservation Biology” class.
Over the past 10 years, he has focussed on two key aspects of the ecology of reef fishes that directly inform conservation strategies. In each of these fields, his teams have been responsible for developing new technologies that are changing our views on fundamental aspects reef fish ecology.
The first research topic centres on direct estimates of larval dispersal using genetic parentage analysis, and the significance of self-recruitment and connectivity for meta-population dynamics and the design of marine reserve networks. The second research topic focusses on population and community responses of reef fishes to changes in habitat structure, with particular reference to coral cover, coral diversity and habitat complexity.
His team's experimental work has exposed a high level of sophistication in the ability of reef fish to discriminate among habitats, a previously undiscovered level of species-specific interaction among fish and corals, and the extraordinary extinction risk associated with the declining health of coral reef habitats.
- Publications
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These are the most recent publications associated with this author. To see a detailed profile of all publications stored at JCU, visit ResearchOnline@JCU. Hover over Altmetrics badges to see social impact.
- Journal Articles
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- Munday P, Dixson D, Welch M, Chivers D, Domenici P, Grosell M, Heuer R, Jones G, McCormick M, Meekan M, Nilsson G, Ravasi T and Watson S (2020) Methods matter in repeating ocean acidification studies. Nature, 586, pp. E20-E24, DOI:10.1038/s41586-020-2803-x.
- Salles O, Almany G, Berumen M, Jones G, Saenz-Agudelo P, Srinivasan M, Thorrold S, Pujol B and Planes S (2020) Strong habitat and weak genetic effects shape the lifetime reproductive success in a wild clownfish population. Ecology Letters, 23 (2), pp. 265-273, DOI:10.1111/ele.13428.
- Smallhorn-West P, Gordon S, Dempsey A, Purkis S, Malimali S, Halafihi T, Southgate P, Bridge T, Pressey R and Jones G (in press) Tongan socio-environmental spatial layers for marine ecosystem management. Pacific Conservation Biology, , DOI:10.1071/PC19032.
- Smallhorn-West P, Stone K, Ceccarelli D, Malimali S, Halafihi T, Bridge T, Pressey R and Jones G (2020) Community management yields positive impacts for coastal fisheries resources and biodiversity conservation. Conservation Letters, 13, Article: e12755, DOI:10.1111/conl.12755.
- Smallhorn-West P, Garvin J, Slayback D, DeCarlo T, Gordon S, Fitzgerald S, Halafihi T, Jones G and Bridge T (2020) Coral reef annihilation, persistence and recovery at Earth's youngest volcanic island. Coral Reefs, 39, pp. 529-536, DOI:10.1007/s00338-019-01868-8.
- Bellwood D, Pratchett M, Morrison T, Gurney G, Hughes T, Álvarez-Romero J, Day J, Grantham R, Grech A, Hoey A, Jones G, Pandolfi J, Tebbett S, Techera E, Weeks R and Cumming G (2019) Coral reef conservation in the Anthropocene: confronting spatial mismatches and prioritizing functions. Biological Conservation, 236, pp. 604-615, DOI:10.1016/j.biocon.2019.05.056.
- Bode M, Leis J, Mason L, Williamson D, Harrison H, Choukroun S and Jones G (2019) Successful validation of a larval dispersal model using genetic parentage data. PLoS Biology, 17 (7), Article: e3000380, DOI:10.1371/journal.pbio.3000380.
- Bode M, Leis J, Mason L, Williamson D, Harrison H, Choukroun S and Jones G (2019) Successful validation of a larval dispersal model using genetic parentage data. PLoS Biology, 17 (7), Article: e3000380, DOI:10.1371/journal.pbio.300038.
- Crosbie A, Bridge T, Jones G and Baird A (2019) Response of reef corals and fish at Osprey Reef to a thermal anomaly across a 30 m depth gradient. Marine Ecology - Progress Series, 622, pp. 93-102, DOI:10.3354/meps13015.
- Eurich J, Matley J, Baker R, McCormick M and Jones G (2019) Stable isotope analysis reveals trophic diversity and partitioning in territorial damselfishes on a low-latitude coral reef. Marine Biology, 166 (2), Article: 17, pp. 1-14, DOI:10.1007/s00227-018-3463-3.
- Frisch A, Hobbs J, Hansen S, Williamson D, Bonin M, Jones G and Rizzari J (2019) Recovery potential of mutualistic anemone and anemonefish populations. Fisheries Research, 218, pp. 1-9, DOI:10.1016/j.fishres.2019.04.018.
- Giffin A, Rueger T and Jones G (2019) Ontogenetic shifts in microhabitat use and coral selectivity in three coral reef fishes. Environmental Biology of Fishes, 102 (1), pp. 55-67, DOI:10.1007/s10641-019-0842-7.
- More
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ResearchOnline@JCU stores 235+ research outputs authored by Prof Geoff Jones from 1991 onwards.
- Current Funding
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Current and recent Research Funding to JCU is shown by funding source and project.
Australian Research Council - Discovery - Projects
Conserving coral reef fish and sustaining fisheries in the anthropocene
- Indicative Funding
- $620,000 over 4 years
- Summary
- This project aims to re-evaluate principles for designing marine reserves to conserve reef fish and sustain fisheries under current and future scenarios of habitat quality and population connectivity. It will integrate advanced genetic methods, novel field experiments and new quantitative approaches to optimise reserve network design to promote population recovery, persistence and yield for a range of fish species. It will recommend optimal reserve size, spacing and location for geographic regions subject to different levels of habitat degradation and fishing pressure. It will benefit Australia and our regional neighbours by providing the critical science necessary for the successful management of shared coral reef assets and resources.
- Investigators
- Geoff Jones and Michael Bode in collaboration with Malin Pinsky, Serge Planes and Michael Berumen (College of Science & Engineering, Queensland University of Technology, Rutgers the State University of New Jersey - New Brunswick, Centre National de la Recherche Scientifique and King Abdullah University of Science and Technology)
- Keywords
- Connectivity; Great Barrier Reef; marine reserve; Coral Reef Fish; Habitat Degradation
Australian Society for Fish Biology - Video Competition Award
Ecological significance of gorgonian sea fans on coral reefs and the consequences of declining health.
- Indicative Funding
- $2,000 over 2 years
- Summary
- Gorgonian sea fans are iconic biotic structures on coral reefs that draw attention to photographers wishing to illustrate the diversity and beauty of coral reef habitats. They provide a unique habitat for a huge variety myriad of coral reef fishes and invertebrates. However, in recent years sea fans have suffered from a variety of anthropogenic stresses that have increased the prevalence of disease. The degree to which associated fishes and invertebrates are dependent on sea fans and the consequences of declining health are unknown. This project aims to quantify the abundance and spatial distributions of gorgonian sea fans, to examine the fauna that live in them, and to evaluate the effects of declining health at two locations (Orpheus Island, Australia and in Kimbe Bay, Papua New Guinea). Habitat composition and reef morphology will be analyzed to assess gorgonian habitat preferences. The health of sea fans will be quantified and the effects of different stages of declining health on fishes and invertebrates will be assessed.
- Investigators
- Geoff Jones, Maya Srinivasan and Marta Panero (College of Science & Engineering)
- Keywords
- Gorgonians; Disease; Habitat Structure; Specialization; Disturbance; gorgonian genera (Annella, Melithaea)
Fisheries Society of the British Isles - Travel Grant
Importance of Solitary and Structurally Complex Sponges as shelter and Feeding Substratum for Coral Reef Fishes
- Indicative Funding
- $1,788
- Summary
- To present findings from my second data chapter, which considers the importance of sponges as an important source of structure, or as a source of food for coral reef fishes, at the 14th International Coral Reef Symposium in Bremen, Germany. Initially scheduled for 5-11 July 2020, this has now been postponed until 18-23 July 2021 due to the COVID-19 outbreak. Recognising the role of other space-holding organisms on coral reefs is particularly prevalent in light of the current global threats toward coral reefs. As the primary international conference for coral reef science, this is a key symposium for communicating data.
- Investigators
- Amy Coppock, Geoff Jones and Mike Kingsford (College of Science & Engineering)
- Keywords
- Coral reef fish ecology; Three-dimensional structure; Sponges (Porifera); Habitat preferences; Inter-relationships; Dietary preferences
Australian Research Council - Centres of Excellence
ARC Centre of Excellence for Integrated Coral Reef Studies
- Indicative Funding
- $28,000,000 over 7 years
- Summary
- The overarching aim of the ARC Centre of Excellence for Integrated Coral Reef Studies is to provide the scientific knowledge necessary for sustaining ecosystem goods and services of the world's coral reefs, which support the livelihoods and food security of millions of people in the tropics. The Centre will enhance Australia's global leadership in coral reef science through three ambitious research programs addressing the future of coral reefs and their ability to adapt to change. A key outcome of the research will be providing tangible benefits to all Australians by bui8lding bridges between the natural and social sciences, strengthening capacity, and informing and supporting transformative changes in coral reef governance and management.
- Investigators
- Terry Hughes, Ove Hoegh-Guldberg, Malcolm McCulloch, Peter Mumby, Sean Connolly, John Pandolfi, Bob Pressey, Andrew Baird, David Bellwood, Joshua Cinner, Sophie Dove, Maja Adamska, Mia Hoogenboom, Geoff Jones, Mike Kingsford, Ryan Lowe, Mark McCormick, David Miller, Philip Munday, Morgan Pratchett, Garry Russ and Tiffany Morrison in collaboration with Janice Lough, David Wachenfeld, Stephen Palumbi, Serge Planes and Philippa Cohen (ARC Centre of Excellence for Coral Reef Studies, The University of Queensland, The University of Western Australia, College of Science & Engineering, Australian National University, College of Public Health, Medical & Vet Sciences, Australian Institute of Marine Science, Great Barrier Reef Marine Park Authority, Stanford University, Centre National de la Recherche Scientifique and WorldFish)
- Keywords
- coral reef ecosystems; Climate Change Adaptation; ecological resilience; biodiversity goods and services; social-ecological dynamics
SeaWorld Research and Rescue Foundation Inc - Research Grant
Functional connectivity in pinnacle-reef mesopredator fishes: ecological considerations for fisheries management
- Indicative Funding
- $39,314 over 2 years
- Summary
- This project aims to determine habitat use and residency patterns in key coral reef mesopredatory fishes large carnivores, themselves subject to predation). The study will take place in Kimbe Bay, West New Britain, Papua New Guinea, a location identified by the Nature Conservancy as critical for preserving marine biodiversity in the Coral Triangle. Acoustic telemetry (underwater radio receivers) will be used to investigate three important species and the study will provide critical information about how these organisms utilise a range of habitats in the region. Project findings should prove invaluable for future conservation and sustainability planning for the region.
- Investigators
- Geoff Jones and Mark McCormick in collaboration with Gemma Galbraith, Ben Cresswell and Alex Filous (College of Science & Engineering and University of Massachusetts)
- Keywords
- Mesopredator; Migration; Fisheries; Submerged reefs; Connectivity; Sustainable Development
Great Barrier Reef Marine Park Authority - Reef 2050 Integrated Monitoring and Reporting Program (RIMReP) - Contract Research
Assessing the Ecological Effects of Management Zoning on Inshore Reefs of the Great Barrier Reef Marine Park
- Indicative Funding
- $520,000 over 3 years
- Summary
- This proposed project will provide an assessment of the ecological effects of management zoning on inshore reefs of the Great Barrier Reef marine Park (GBRMP). The proposed research will build upon and enhance our long-term monitoring program that has a strong track record of delivering findings that have proven to be highly relevant and useful to the GBRMPA and a range of Marine Park stakeholders. The key objectives are to provide a robust assessment of the effects of the GBRMP zoning plan on: *Abundance and population structure of fishery target species *Reef fish and benthic (coral) community composition, status and dynamics *Reef community productivity and resilience *Usage patterns of recreational fishers and compliance with zoning regulations
- Investigators
- David Williamson, Garry Russ, Geoff Jones and Daniela Ceccarelli (ARC Centre of Excellence for Coral Reef Studies)
- Keywords
- Great Barrier Reef; Management Zoning; Biodiversity; Coral Reef; Fisheries; Resilience
- Supervision
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Advisory Accreditation: I can be on your Advisory Panel as a Primary or Secondary Advisor.
These Higher Degree Research projects are either current or by students who have completed their studies within the past 5 years at JCU. Linked titles show theses available within ResearchOnline@JCU.
- Current
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- Seascape connectivity and ecology in pinnacle reef fishes (PhD , Primary Advisor/AM/Adv)
- The Role of Hybridisation in the Evolution of Coral Reef Fishes (PhD , Secondary Advisor)
- The influence of multiple habitat types on coral reef fish communities and No Take Marine Reserve performance. (PhD , Secondary Advisor)
- The effects of habitat degradation on live coral associated reef fishes (PhD , Secondary Advisor)
- Latitudinal Variations in Age-based Demography of Three Large Predatory Reef Fishes (Lutjanus sebae, Lutjanus malabaricus and Lutjanus erythropterus) in Queensland, Australia. (PhD , Secondary Advisor)
- The impact of parrotfishes on the coral new recruits (PhD , Primary Advisor/AM/Adv)
- Gorgonian Sea Fans: Abundance, Distribution, Ecological Interactions with Fish Assemblages and Responses to their Decline in Health (Masters , Primary Advisor/AM/Adv)
- Importance of solitary, structurally complex, sponges as habitat and food for coral reef fishes (PhD , Primary Advisor/AM/Adv)
- Submerged Pinnacle Coral Reefs and Reef Fish Ecology (PhD , Primary Advisor/AM/Adv)
- Effects of vessel noise on the behaviour and physiology of coral reef fishes (PhD , Primary Advisor/AM/Adv)
- The Cave Dwellers: Distribution, Abundance, Ecological Partitioning and Social Organisation of the Genus Trimma on Coral Reefs (Masters , Primary Advisor/AM/Adv)
- Completed
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- Social relationships in a small habitat-dependent coral reef fish: an ecological, behavioural and genetic analysis (2016, PhD , Secondary Advisor)
- The effect of parental and embryonic predator environments on offspring (2016, PhD , Secondary Advisor)
- The short- & long-term implications of marine reserves for fisheries on coral reefs (2016, PhD , Secondary Advisor)
- Habitat degradation and competition for resources in coral reef fishes (2016, PhD , Primary Advisor)
- Effects of climate change-induced thermal stress and habitat degradation to the biodiversity and species composition of coral-associated invertebrates (2016, PhD , Primary Advisor)
- Effects of temperature and food availability on the antipredator behaviour of juvenile coral reef fishes (2016, PhD , Secondary Advisor)
- Priority effects and the dynamics of coral reef fish assemblages (2016, PhD , Secondary Advisor)
- Competition and habitat selection in coral-dwelling fishes (2016, PhD , Secondary Advisor)
- Habitat preferences and associations of juvenile algal-associated fishes on coral reefs (2017, Masters , Primary Advisor)
- A multi-disciplinary evaluation of the hybrid anemonefish Amphiprion leucokranos: behaviour shaping evolutionary outcomes of hybridization (2017, PhD , Secondary Advisor)
- Controlling mesopredators: importance of behavioural interactions in trophic cascades (2017, PhD , Secondary Advisor)
- Coral reef mesopredator trophodynamics in response to reef condition (2017, PhD , Secondary Advisor)
- Processes underlying the fine-scale partitioning and niche diversification in a guild of coral reef damselfishes (2018, PhD , Primary Advisor/AM/Adv)
- Small cryptic fishes on coral reefs: ecological effects of extreme life history traits (2016, Masters , Secondary Advisor)
- Depth as refuge: depth gradients in ecological pattern, process, and risk mitigation among coral reef fishes (2019, PhD , Primary Advisor/AM/Adv)
- Assessing the impact of coral reef community management in the Kingdom of Tonga (2020, PhD , Primary Advisor/AM/Adv)
- Ecological determinants of depth zonation in reef-building corals (2018, PhD , Secondary Advisor)
- Data
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These are the most recent metadata records associated with this researcher. To see a detailed description of all dataset records, visit the JCU Research Data Catalogue.
- Gainsford, A. (2017) Data from: Hierarchical behaviour, habitat use and species size differences shape evolutionary outcomes of hybridization in a coral reef fish. James Cook University
- Brooker, R. (2017) Data from: You are what you eat: diet-induced chemical crypsis in a coral-feeding reef fish. James Cook University
- Harrison, H. (2017) Data from: Widespread hybridisation and bi-directional introgression in sympatric species of coral reef fish. James Cook University
- Bonin, M. (2017) Data from: The role of marine reserves in the replenishment of a locally-impacted population of anemonefish on the Great Barrier Reef. James Cook University
- Williamson, D. (2017) Data from: Large-scale, multi-directional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park. James Cook University
- Collaboration
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The map shows research collaborations by institution from the past 7 years.
Note: Map points are indicative of the countries or states that institutions are associated with.- 5+ collaborations
- 4 collaborations
- 3 collaborations
- 2 collaborations
- 1 collaboration
- Indicates the Tropics (Torrid Zone)
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