Research Data

Genetic Audit of Australian Barramundi (Lates calcarifer) - 2013

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General
Title
Genetic Audit of Australian Barramundi (Lates calcarifer) - 2013
Type
Dataset
Date Record Created
2013-10-31
Date Record Modified
(no information)
Language
English
Coverage
Date Coverage
1988 to 2013
Time Period
(no information)
Geospatial Location
Description
Descriptions
  1. Type: full

    This dataset contains electronic appendices including raw data and summary genetic statistics associated with the final report for FRDC project No. 2010/521. Report Title: Vulnerability of an iconic Australian finfish (barramundi – Lates calcarifer) and aligned industries to climate change across tropical Australia Report Authors: Dean R. Jerry, Carolyn Smith-Keune, Lauren Hodgson, Igor Pirozzi, A. Guy Carton, Kate S. Hutson, Alexander K. Brazenor, Alejandro Trujillo Gonazlez, Stephen Gamble, Geoff Collins and Jeremy VanDerWal The appendices include: E1: a table of microsatellite allele definitions used in the project E2: a table of the raw data consisting of 16 locus microsatellite genotypes E3: a matrix of the pairwise Fst values for 48 barramundi collections across Australia E4: a summary table of Fishers' Exact Tests for differentiation between 48 barramundi collections E5: a summary table of the allele frequencies for 16 microsatellite loci within 21 identified subpopulations of barramundi across Australia. The raw data given in E2 is currently an example only and the full dataset will be made available later at the time of journal article publication. All data and associated summary genetic statistics were generated by Carolyn Smith-Keune with the assistance of Shannon Loughnon (Flinders University) and are from barramundi tissue samples spread across 48 collections including 43 locations within Northern Australia from the Pilbara region in Western Australia to the Mary River in Queensland. The raw data consists of individual fish genotypes for 16 microsatellite DNA markers genotyped at James Cook University.

Related Publications
(no information)
Related Websites
  1. Impacts of Climate Change on Barramundi Stocks
    Research Project information page
Related Data
(no information)
Related Services
(no information)
Technical metadata
(no information)
People
Creators
  1. Aggregated by: Dr Carolyn Smith-Keune , Discipline of Aquaculture, Centre for Sustainable Tropical Fisheries and Aquaculture, School of Marine & Tropical Biology
  2. Managed by: Prof Dean Jerry , School of Marine & Tropical Biology, Centre for Sustainable Tropical Fisheries and Aquaculture, Discipline of Aquaculture
Primary Contact
Prof Dean Jerry, dean.jerry@jcu.edu.au
Supervisors
(no information)
Collaborators
  1. Shannon Loughnan (Flinders University)
Subject
Fields of Research
  1. 060411 - Population, Ecological and Evolutionary Genetics (060411)
Socio-Economic Objective
  1. 830204 - Wild Caught Fin Fish (excl. Tuna) (830204)
Keywords
  1. Barramundi
  2. Genetics
  3. Fisheries management
Research Activity
(no information)
Research Themes
Tropical Ecosystems, Conservation and Climate Change
Industries and Economies in the Tropics
Rights
License
CC BY-NC: Attribution-Noncommercial 3.0 AU
License - Other
(no information)
Access Rights/Conditions
Desensitised data is available under open access - if the data is not available via the link provided please contact researchdata@jcu.edu for assistance. The complete dataset is only available by negotiation with the data manager (Prof Jerry; dean.jerry@jcu.edu.au).
Type
(no information)
Rights
(no information)
Data
Data Location
Online Locations
Attachments
  1. FRDC2010_521_ElectronicAppendicesE1toE5_PUBLIC.xlsx (Data File, Public)
Stored At
Centre for Sustainable Tropical Fisheries and Aquaculture School of Marine & Tropical Biology James Cook University Townsville QLD 4811 Australia
Citation
Cite:
Smith-Keune, Carolyn.; Jerry, Dean. (2013). Genetic Audit of Australian Barramundi (Lates calcarifer) - 2013. James Cook University. (dataset). jcu.edu.au/tdh/collection/0d7bb8111a792482b5ef063211e75423