Research Data

Parasite detection in the ornamental fish trade using environmental DNA

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General
Title
Parasite detection in the ornamental fish trade using environmental DNA
Type
Dataset
Date Record Created
2018-08-23
Date Record Modified
2020-01-21
Language
English
Coverage
Date Coverage
2015-01-12 to 2015-10-31
Time Period
(no information)
Geospatial Location
  • Following release by Quarantine Services (Department of Agriculture and Water Resources), fish were transported to an Approved Arrangement Laboratory at the Sydney School of Veterinary Sciences, University of Sydney, Camden, Australia
Description
Descriptions
  1. Type: full

    The following dataset was collected as part of a PhD thesis candidature by Alejandro Trujillo-González. Data provides threshold cycles (Ct) and melting temperature (Tm) values determined for amplicons in quantitative PCR tests and assays ran in a QuantStudio3™ Real-Time PCR System (ThermoFisher Scientific Inc., Brisbane) using QuantStudio™ Design and Analysis Software (version 1.4.2).

    The full methodology is available in the Open Access publication from the Related Publications link below.

  2. Type: note

    This dataset is available as a spreadsheet in MS Excel (.xlsx) and Open Document formats (.ods)

Related Publications
  1. Trujillo-González, Alejandro, Edmunds, R. C., Becker, J. A., and Hutson, K. S. (2019) Parasite detection in the ornamental fish trade using environmental DNA. Scientific Reports, 9. 5173.
    Open Access
Related Websites
(no information)
Related Data
(no information)
Related Services
(no information)
Technical metadata
(no information)
People
Creators
  1. Owned by: Mr Alejandro Trujillo Gonzalez , alejandro.trujillogonzalez@my.jcu.edu.au , College of Science & Engineering, Centre for Sustainable Tropical Fisheries and Aquaculture
Primary Contact
Mr Alejandro Trujillo Gonzalez, alejandro.trujillogonzalez@my.jcu.edu.au
Supervisors
  1. Dr Kate Hutson , kate.hutson@jcu.edu.au
Collaborators
  1. Dr Richard Edmunds, TropWATER, James Cook University
  2. Dr Joy Becker, Sydney University
Subject
Fields of Research
  1. 069999 - Biological Sciences not elsewhere classified (069999)
  2. 050103 - Invasive Species Ecology (050103)
Socio-Economic Objective
  1. 830199 - Fisheries - Aquaculture not elsewhere classified (830199)
  2. 830299 - Fisheries - Wild Caught not elsewhere classified (830299)
  3. 910302 - Trade Assistance and Protection (910302)
Keywords
  1. environmental DNA
  2. ornamental fish
  3. border control
  4. Dactylogyrus
  5. quantitative PCR
Research Activity
(no information)
Research Themes
Tropical Ecosystems, Conservation and Climate Change
Tropical Health, Medicine and Biosecurity
Rights
License
CC BY-SA: Attribution-Share Alike 3.0 AU
License - Other
(no information)
Access Rights/Conditions
Open access. If the data is not freely accessible via the link provided, please contact the nominated data manager or researchdata@jcu.edu.au for assistance.
Type
open
Rights
(no information)
Data
Data Location
Online Locations
Attachments
  1. Dataset_Parasite_Detection.ods (Data File, Public)
  2. Dataset_Parasite_Detection.xlsx (Data File, Public)
Stored At
(no information)
Citation
Cite:
Trujillo Gonzalez, A. (2018). Parasite detection in the ornamental fish trade using environmental DNA. James Cook University. (dataset). http://dx.doi.org/10.25903/5b90c1897397a
Digital Object Identifier (DOI):
10.25903/5b90c1897397a