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Family and population genotypic data from the commercial Infinium ShrimpLD-24 BeadChip

Genotypic data generated by running 1,952 individuals from wild populations and 19 families across the commercial Infinium ShrimpLD-24 BeadChip. Data is associated with the publication: Jones, D.B., Nguyen H.T., Khatkar, M.S., Simma D.B., Jerry, D.R., Raadsma H.W., van der Steen H., Prochaska J., Zenger K.R.. The identification of a major sex QTL in the white-leg shrimp, Litopenaeus vannamei. Aquaculture. (2020). 

The full methodology is available in the Open Access publication from the Related Publications link below.

 

 
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    Data Record Details
    Data record related to this publication Family and population genotypic data from the commercial Infinium ShrimpLD-24 BeadChip
    Data Publication title Family and population genotypic data from the commercial Infinium ShrimpLD-24 BeadChip
  • Description

    Genotypic data generated by running 1,952 individuals from wild populations and 19 families across the commercial Infinium ShrimpLD-24 BeadChip. Data is associated with the publication: Jones, D.B., Nguyen H.T., Khatkar, M.S., Simma D.B., Jerry, D.R., Raadsma H.W., van der Steen H., Prochaska J., Zenger K.R.. The identification of a major sex QTL in the white-leg shrimp, Litopenaeus vannamei. Aquaculture. (2020). 

    The full methodology is available in the Open Access publication from the Related Publications link below.

     

     

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  • Other Descriptors
    • Descriptor

      This dataset consists of a spreadsheet saved in both MS Excel (.xlsx) and Open Document (.ods) formats.

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      Descriptor type Note
    • Data type dataset
  • Keywords
    • aquaculture
    • Litopenaeus vannamei
    • quantitative trait loci
    • sex-linked markers
    • GWAS
    • monosex culture
  • Funding source
  • Research grant(s)/Scheme name(s)
    • Research themes
    Industries and Economies in the Tropics
    FoR Codes (*)
    SEO Codes
- Specify coverage
    Specify spatial or temporal setting of the data
    Temporal (time) coverage
  • Start Date 2010/01/04
  • End Date 2013/12/27
    • Time Period
    Spatial (location) coverage
  • Locations
- Data
    Data Locations

    Type Location Notes
    The Data Manager is: David Jones
    College or Centre
    Access conditions Conditional: Contact researchdata@jcu.edu.au to request access to this data.
  • Alternative access conditions
    • Data record size 44 MB
- Related resources
  • Related publications
      Name Jones, David B., Jerry, Dean R., Khatkar, Mehar, Raadsma, Herman W., van der Steen, Hein, Prochaska, Jeffrey, Fôret, Sylvain, and Zenger, Kyall R. (2017) A comparative integrated gene-based linkage and locus ordering by linkage disequilibrium map for the Pacific white shrimp, Litopenaeus vannamei. Scientific Reports, 7. 10360.
    • URL https://doi.org/10.1038/s41598-017-10515-7
    • Notes Open Access
  • Related websites
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    • URL
    • Notes
  • Related metadata (including standards, codebooks, vocabularies, thesauri, ontologies)
  • Related data
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- License
- Citation
    Citation Jones, David; Jerry, Dean (2020): Family and population genotypic data from the commercial Infinium ShrimpLD-24 BeadChip. James Cook University. https://doi.org/10.25903/5ef4068a75bce