About

Matt Field is a Senior Research Fellow in Bioinformatics at the Australian Institute of Tropical Health and Medicine at James Cook University. He currently holds an NHMRC CJ Martin Early Career Research Fellowship and was recently awarded the Frank Fenner Early Career Fellowship awarded to the highest scoring ECR applicant. He specialises in the development of high-throughput bioinformatic analysis pipelines.

In the last five years Dr Field has published 25 peer reviewed publications in high impact journals such as Nature (x2), Nature Methods, and PNAS (x2) which have been cited over 2500 times. He is also a Chief Investigator for the Centre for Personalised Immunology, an NHMRC Centre of Research Excellence focused on bringing genomics and personalized medicine into routine clinical practice.

From 2010 to 2015 Dr Field worked as Senior Bioinformatics Manager at the Australian National University developing software to uncover the underlying genetic cause of human diseases such as lupus, diabetes, and melanoma. During this time he developed a high-throughput variant detection pipeline which has analysed over 4000 exomes and 3000 genomes to date. While at ANU, he completed a PhD in medical science titled "Computational Analysis of Genetic Variation" with supervisor Chris Goodnow .

From 2004 to 2010 Dr Field worked as Assistant Bioinformatic Coordinator at the Genome Sciences Centre in Canada leading a group of bioinformaticians in a high-throughput research environment studying a variety of cancers. Prior to this, he completed two Bachelor of Science degrees from the University of British Columbia in computer science (2004) and biology (1998).

 

Teaching
  • BC3203: Bioinformatics (Level 3; TSV)
  • BC5203: Advanced Bioinformatics (Level 5; TSV)
Interests
Research
  • Develop robust high-throughput bioinformatics analysis pipelines
  • Develop software to discover the underlying genetic cause of human disease
  • Incorporate clinical genomics into the public health system
  • Discover how the human microbiome affects human health
Teaching
  • Introduce clinicians, bench biologists and computer scientists to bioinformatics
Experience
  • 2016 to present - Senior Bioinformatics Fellow, James Cook University (Cairns, Australia)
  • 2010 to present - Senior Bioinformatics Manager, Australian National University (Canberra, Australia)
  • 2010 - Bioinformatics Software Development Team Leader, Biomatters (Auckland, New Zealand)
  • 2004 to 2010 - Assistant Bioinformatics Coordinator, Genome Sciences Centre (Vancouver, Canada)
Research Disciplines
Socio-Economic Objectives
Honours
Awards
  • 2017 - Frank Fenner Early Career Fellowship
Fellowships
  • 2018 to 2021 - NHMRC CJ Martin Fellowship
Publications

These are the most recent publications associated with this author. To see a detailed profile of all publications stored at JCU, visit ResearchOnline@JCU. Hover over Altmetrics badges to see social impact.

Journal Articles
More

ResearchOnline@JCU stores 30+ research outputs authored by Dr Matt Field from 2004 onwards.

Current Funding

Current and recent Research Funding to JCU is shown by funding source and project.

NHMRC - Early Career Fellowship - Australian Public Health and Health Services Fellowship

Developing Core Bioinformatics Capacity at the Australian Institute of Tropical Health and Medicine

Indicative Funding
$327,193 over 4 years
Summary
Cost effective next generation sequencing is now a reality, meaning the bottleneck for research projects has shifted from data generation to data analysis. Researchers at the Australian Institute of Health and Tropical Medicine (AITHM) are engaged in an increasing number of high-impact research projects that require timely access to high-throughput bioinformatics best-practices methodologies. This proposal outlines strategies to develop support for projects requiring bioinformatics within AITHM.
Investigators
Matt Field (Australian Institute of Tropical Health & Medicine)
Keywords
Bioinformatics; Genomics; Computational Biology

Menzies School of Health Research - Ext_Source: NHMRC NATDCRP Hot North Pilot

Genomics for Undiagnosed Infectious Disease Evaluation and Diagnosis in Northern Australia

Indicative Funding
$5,000 (administered by QIMR)
Summary
Diagnosis of scabies mostly relies on clinical symptoms as mites are extremely difficult to find in skin lesions of ordinary scabies (<20) which leads to under/misdiagnosis. This pilot project will address a long wanted need to develop a rapid diagnostic test for scabies. It is anticipated that this new DNA test will be highly sensitive and specific and will outperform standard microscopy. This will provide a powerful tool in scabies diagnosis particulary useful in clinical trials and epidemiologic studies.
Investigators
James McCarthy, Bart Currie and Matt Field (QIMR Berghofer Medical Research Institute, Royal Darwin Hospital and Australian Institute of Tropical Health & Medicine)
Keywords
skin health; NGS; Scabies; diagnostics; Genomics; Bioinformatics
Supervision

Advisory Accreditation: I can be on your Advisory Panel as a Primary or Secondary Advisor.

These Higher Degree Research projects are either current or by students who have completed their studies within the past 5 years at JCU. Linked titles show theses available within ResearchOnline@JCU.

Current
  • Venom Ecology and Phylogeography of the Estuarine Stonefish (Synanceia Horrida) and Reef Stonefish (Synanceia Verrucosa) (PhD , Secondary Advisor)
  • Molecular Profiling of Immunity to Infections and Chronic Disease in Humans using Sytems Immunology (PhD , Secondary Advisor)
  • High throughput production and screening of hookworm derived anti-imflammatory proteins. (PhD , Secondary Advisor)
Collaboration

The map shows research collaborations by institution from the past 7 years.
Note: Map points are indicative of the countries or states that institutions are associated with.

  • 5+ collaborations
  • 4 collaborations
  • 3 collaborations
  • 2 collaborations
  • 1 collaboration
  • Indicates the Tropics (Torrid Zone)

Connect with me
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Email
Phone
Location
  • E1.016U, Health & Sciences (Cairns campus)
Advisory Accreditation
Primary Advisor (P)
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